Sentence examples for based on low coverage from inspiring English sources

It is reported in dbSNP at 0.7% based on low coverage sequence of ~600 individuals from the 1000 Genomes project (4 individuals).

Nuclear genes were pruned out based on low coverage (supplementary table S3, Supplementary Material online) of the respective contigs in the mitochondrial fraction.

There is a need to strengthen existing programmes to maintain immunisation achievements and to accurately capture coverage levels to determine which districts should be prioritised based on low coverage levels and high child population (61, 62).

Overall, our assemblies were not based on low coverage genomes (Table 1), thus sequencing errors are not very likely to contribute significantly to disrupting mutations, since this is expected for a coverage of 3 reads or less.

As the enrichment of the mitochondrial fraction was confirmed by qPCR, the nucleus-encoded mitochondrial proteins were identified based on low coverage of corresponding contigs (supplementary table S3, Supplementary Material online), and were not considered further.

Countries were excluded from consideration based on low coverage of DTP3/Penta3, little recent change in DTP3/Penta3 coverage, lack of representativeness on key background variables (e.g. gross national product and population size) and being a conflict or post-conflict setting.

The one based on low-coverage whole genome resequencing [ 30] is very appealing especially in considering that chromosome 3B is readily sortable by flow cytometry [ 31].

We have shown that the sequence-based genotyping method can provide an ultra-high density genetic map of high quality SNPs, based on low-coverage sequences of a rice RIL population.

Recently, Spindel et al.[ 27] developed a custom-designed pipeline for SNP imputation, error correction, and streamlined data analysis based on low-coverage sequencing of a RIL population.

However, since previous immunoproteogenomics studies were based on low-coverage 454 technology, it was not clear whether this lack of correlation represents sampling artifacts or reflects the fact that previous immunoproteogenomics studies did not correct sequencing errors.

It would be interesting to compare the variant calls of this study to the population based UK10K-cohorts call set which is based on low-coverage whole-genome sequencing of 3781 samples (UK10K Consortium, 2015).