Sentence examples for based on hierarchical likelihood from inspiring English sources

We identified the most appropriate nucleotide substitution model, based on hierarchical likelihood ratio tests (hLRTs), Akaike Information criterion (AIC) and bayesian information criterion (BIC) values, using PHYML [35] in a similar way to Modeltest [36].

(2005) used a complex procedure based on hierarchical likelihood to perform a robust analysis.

MrModeltest v2.2 [ 36] was used to determine the most appropriate model of nucleotide substitution based on hierarchical likelihood ratio tests.

ModelTest [ 45] was used to select the optimal evolutionary model for each dataset, based on hierarchical likelihood ratio tests.

The LG amino acid substitution matrix with gamma rate correction was selected based on hierarchical likelihood ratio tests of the optimal tree calculated using the JTT amino acid substitution matrix (the PROTGAMMAJTT model in RAxML) [ 78].

The general time reversible model with a proportion of invariable sites and a discrete gamma distribution for the variable sites (GTR+I+Γ) was chosen based on hierarchical likelihood ratio tests and the Akaike information criterion conducted with Modeltest version 3.7 [ 68] for ML analyses and with MrModeltest version 2.3 [ 69] for Bayesian analyses.

The best fitting, least-parameter rich model of sequence evolution was based on hierarchical likelihood-ratio test in the program ModelGenerator0.6 [ 61].

Table 1 also includes two further statistics at each bin: partial association Likelihood Ratio Chi-Squares (LRCS) based on hierarchical log-linear models (see Scheepers, 2003), and repeated measure t-tests.

The centralized approach is based on hierarchical trading.

The structure of the repository is based on hierarchical collections.

Type-3 architecture is based on hierarchical fusion of decisions.