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We tabulated the number of CRISPRs in GIs and compared it to the expected number based on genome size and CRISPR frequency.
The relative abundance predicted based on genome size and cell counts (cc*gs) is shown in Figure 3. Using the cc*gs predictor of relative organism abundance, we tested whether the observed abundances followed the expected distribution.
At position 11, the motif varies based on genome size.
The age of formation of T. araraticum is still unkown and cannot be concluded based on genome size.
Without a reference genome, the total number of restriction sites can be simply predicted based on genome size and GC content by assuming sites that are Poisson distributed.
Estimates of gene content based on genome size are possible; recent work by Hou and Lin [ 47] shows a strong non-linear correlation between genome size and protein-coding gene number across a broad range of eukaryotes.
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Based on genome sizes of free-living autotrophs (~2 Mb in size), the genome of the vesicomyid clam symbionts is only reduced by half.
These complex datasets thus covered roughly 56%, and 85% of E. coli and yeast genomes respectively based on genome sizes of 3952 and 5586 genes (genome sizes were taken from Integr8 [ 42]). Figure 1d shows the size distribution of complexes.
According to our parsimony reconstructions (based on genome sizes and the presence/absence of orthologs in genomes), the genome size of the most recent common ancestor (MRCA) of cyanobacteria was approximately 4.5 Mbp and contained 1678-3291 protein-coding genes.
Ohno,s idea was based solely on genome size differences, chromosomal topologies, and recent tetraploidization events in some fish and amphibians.
The final 9594 scaffolds spanned 220.8 M with an N50 scaffold size of 814.2 Kb, and contained approximately 82.5% of the A. sinensis genome, based on a genome size of 267.7 Mb.
More suggestions(15)
based on size size
based on genome coverage
based on group size
based on body size
based on genome location
based on yard size
based on genome sequencing
based on genome availability
based on genome analysis
based on genome arrangement
based on genome structure
based on genome complexity
based on genome engineering
based on genome position
based on genome annotation
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