Sentence examples for based on gene order from inspiring English sources

Distances between complete genomes can be computed by estimating the number of rearrangements needed to transform one genome into another based on gene order.

However, trees based on gene order, lack resolution as there are very few genome rearrangements observed in nature [19].

Phylogenetic analyses based on gene order (fig. 3 A and B) were ambiguous.

Based on gene order alone, the most parsimonious position for Xenoturbella is as a basal hemichordate (hypothesis X6, table 1).

The relative chromosomal location of the genes, based on gene order in N. crassa, is shown in Figure 1.

These authors found a strong discordance between a phylogeny based on concatenated conserved amino acid sequences and reconstructions based on gene order.

The extent of gene rearrangement within such an evolutionarily young group offers the opportunity to explore gene dynamics such as tRNA remolding, which appears to have been rife within this family, and to investigate its consequences for phylogenetic analyses based on gene orders.

Phylogenetic inferences based on gene-order support earlier sequence-based analyses that suggested that these two insect endosymbionts form a monophyletic group (fig. 5 a– c) (Spaulding and von Dohlen 1998; Thao and Baumann 2004; Sloan and Moran 2012b).

However, phylogenetic trees based on gene content, gene order, and ribosomal proteins places it toghether with the other archaeal methanogens [ 3, 4].

To support the putative orthology of GmMYBs and AtMYBs, we examined the syntenic relationship based on gene content, order, and orientation between the genomes of soybean and Arabidopsis.

Protein domain content, the overall collection of domains in a given proteome, was successfully used to reconstruct a phylogenetic tree of life that was equivalent to standard phylogenies derived from molecular sequences and phylogenomic trees based on gene content and gene order [ 9].