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In addition, reservoir crack widths were modeled in a physical model based on gap distances between glass slides, which were conducted by using 0.02-mm-thick tinfoil.
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Two geographic distance matrices were used, one based on the linear distance and one based on the ln-transformed distance.
Two gene definitions were compared: one based on physical distance and the other based on genetic distance.
Automatic Barcode Gap Discovery (ABGD) and pairwise distances – ABGD is an automated procedure that clusters sequences into candidate species based on pairwise distances by detecting differences between intra- and interspecific variation (i.e., barcoding gap) without a priori species hypothesis [ 39, 55].
The numerous models are clustered and representative models are selected based on the gap metric as the distance measure.
Table 2: Heritability estimates h2 for 10 traits based on Euclidean Distances (EDTs) and 10 traits based on Geodesic Distances (GDTs).
A dendrogram based on Euclidean distances showed four different groups.
Other gene extensions based on genetic distances are possible.
This was congruent with phylogenetic reconstructions based on genetic distances.
Alignments were analyzed using Mega 5 package [ 49] and a phylogenetic tree based on p-distance and pairwise deletions of gaps was constructed using the neighbor joining method with 1,000 bootstrap replicates.
Based on results, gap analysis and the literature synthesis, information gaps and priorities were identified.
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