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In order to reduce this number to a reasonable number of candidate genes, one strategy consists in selecting candidate genes based on functional knowledge (for ex. known biosynthetic pathways; transcriptomic data; annotation inferred from homologous genes in other species) and check if the candidates co-locate with QTLs [ 11, 18, 19].
Gene network analysis, which represents the intermolecular connections among interacting genes based on functional knowledge inputs, was performed on the differentially expressed genes using the IPA program.
Gene network analysis, which represents the intermolecular connections among interacting genes based on functional knowledge inputs, was performed on genes with amino acid changes in SLV chickens using the IPA program.
Gene network analysis, which represents the intermolecular connections among interacting genes based on functional knowledge inputs, was performed on the differentially expressed genes using IPA program (see Additional file 4).
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Most studies of strains being used as probiotics are based on functional properties and less knowledge is available concerning their capacity to withstand stress related to food manufacturing and storage.
These DEGs were first classified by GO annotations, then hand-curated and assigned into different gene networks based on functional enrichment results and prior knowledge of the genes.
This principle is used to build a self-consistent matrix formulation of functional similarity that can be evaluated iteratively using only knowledge of the adjacency matrix of the network (based on functional annotations of genes).
Aiming at capturing such functional knowledge explicitly and sharing it in design teams, we discuss its systematic description based on functional ontologies which provide common concepts for its consistent and generic description.
It is unclear how models of the patch system based on functional maps of visual cortex relate to other areas of cortex, where our knowledge of their respective functional arrangements is either scant or entirely absent.
Research based on functional magnetic imaging (fMRI) scanning, suggests that the brains of psychopaths have different automatic responses.
Classifications are based on functional mobility.
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