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In order to test the ability of our functional network to accurately infer reliable functional annotations and the stage of symbiosis where components of the Symbiosis Interactome may participate, we investigated a basic network-based approach based on functional category membership within predicted functional modules.
Clustering based on genes also showed that genes were expressed similarly based on functional category.
Genes were classified based on functional category and pathways using Gene Spring GX Software and Genotypic Biointerpreter-Biological AnalySoftware and Genotypic Biointerpreter-Biological
Analysis of genes based on functional category was performed to measure the differences and the similarities between the two adipocyte populations.
The selection of these OCs was initially based on functional category variation among the ORFs and OCs with ORFs with long IRs.
Differentially regulated genes were clustered using hierarchical clustering based on Pearson's coefficient correlation algorithm to identify significant gene expression patterns genes were classified based on functional category and pathways using GeneSpringGX Software and Genotypic Biointerpreter -Biological Analysis Software.
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Of the total 47 genes from both SNP and methylation PSFs, we identified 13 shared functional clusters based on functional categories, gene ontology (GO) and pathway information.
We further investigated their relationship by decomposing it based on functional categories, and identified categories with significant tendencies.
S. hexandrum transcript sequences were searched against MIPS Functional Catalogue (FunCat) [ 29] database to classify transcripts based on functional categories classified at MIPS.
Our analysis of the eukaryote/opisthokont core and insect-specific protein sets was based on functional categories representative of high-level GO designations.
In this study, we examined the relationship between protein conservation and promoter conservation in detail, by decomposing it based on functional categories.
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based on functional classifications
based on functional categories
based on functional state
based on functional connectivity
based on functional unit
based on functional class
based on functional outcome
based on functional information
based on functional disability
based on functional impairment
based on functional aggregation
based on inductive category
based on functional annotation
based on functional similarity
based on functional self-application
based on functional transformation
based on functional enrichment
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