Sentence examples for based on expression profile from inspiring English sources

Using a combination of known effector expression profiles and clustering of N. aberrans transcripts based on expression profile we can identify super clusters that contain putative effector sequences for further study.

Pioneered by the Stanford group [ 6- 9] and lately explored by several other groups, a new taxonomy for breast cancer based on expression profile has claimed that the morphological heterogeneity of breast cancer can be recapitulated and systematically classified at the transcriptomic level and into clinically meaningful groups [ 10- 12].

More problematic is the possibility that, as candidates are identified based on expression profile changes after inhibition of NMD, many indirect NMD targets are included [ 31, 39] (for example, those up-regulated by a protein made from an NMD-regulated gene).

In which, the gene/protein network can be the protein interaction network as in [32], the gene semantic similarity network as in [34] as well as one constructed based on expression profiles of genes.

MCF10A is particularly useful for the present studies as based on expression profiling studies it expresses markers most often associated with the basal-epithelial phenotype.

Both unsupervised, hierarchical cluster analysis and supervised, 2-cluster K-means analysis (data not shown) revealed complete separation of the autistic and control groups based on expression profiles of the differentially expressed miRNAs.

We defined an embryonic mammary signature based on expression profiles of genes found highly expressed within midgestation (E12.5-stage) embryonic epithelium compared with postnatal mammary epithelial cells described in Additional file 2[ 13, 13].

Co-expressed gene clusters were predicted based on expression profiles and genomic locations.

Genes encoding non-transcription factor (NTF) proteins (2,456) were further classified based on expression profiles to establish the composition of various co-expressed groups (regulatory clusters) controlled by the different classes of TFs listed in Table 1.

Although cancer stem cell populations have been identified in these tumors [ 41- 43], one cannot conclude that these bear resemblance to MaSCs based on expression profiling studies.

Sub-classifications of HGSOC based on expression profiles, termed 'differentiated', 'immunoreactive'mesenchymalmand and 'proliferative', were shown to have prognostic value.