Sentence examples for based on exon annotation from inspiring English sources

RBP cDNA was assembled based on exon annotation sequence of RBP-PF isoform from flybase.

Additionally, to investigate the presence in mammalian genomes of alternative splicing SMO isoforms, a search in the public databases was performed based on exon VIa sequence annotation [ 10].

To investigate the presence in mammalian genomes of these alternative splicing SMO isoforms and to analyse their sequence conservation, we performed a search in the public databases based on exon VIa sequence annotation that enabled us to retrieve 22 sequences corresponding to the long SMO isoform Table 2.

A hypothesis of the mode of alternative splicing was formulated based on exon array expression profile and available transcript annotations.

Overall, we recommend using the mapping algorithm based on known exon annotation and Scripture combination at a low sequencing depth, and the TopHat and Scripture strategy with high sequencing coverage.

In this method, the read is positioned on the reference genome based on known exon annotations.

New splice events can be identified because the reads are based on known exon annotations.

By this method, 52 novel retrocopies were called based on exon-exon junction data alone.

Gene loci information was based on UCSC exon locus annotation hg19 (http://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/), mm10 (http://hgdownload.cse.ucsc.edu/goldenPath/mm10/database/) and BioMart (http://www.biomart.org/).org/

First, the RNA-Seq analyses of human retinal RNA samples detected 75% of previously annotated exons, based on the combined annotation track used for these studies, which includes over 1 million unique exons.

All methylated genes were annotated based on GO annotation.