Sentence examples for based on existing sequences from inspiring English sources
GSIIE primers were based on existing sequences from vascular plants, chlorophytes and rhodophytes.
GSIIB primers were based on existing sequences from Chlamydomonas reinhardtii and Physcomitrella patens.
In cotton, SSR markers have been mined widely based on existing sequences data from different cotton species [ 2, 12- 17], and applied widely in characterizing variations of genes, genome-wide mapping [ 18- 21], and as a tool for marker-assisted selection [ 22- 26].
Ideally, there should be information immediately available about the hotspots of variation, the key sequence regions or assays that can discriminate among the possible sources of the agent, based on existing sequence data.
sRNAFinder also makes use of the SCFG (Stochastic Context Free Grammar) model used by QRNA and transcript expression profile from microarray data; it predicts the probability in confidence of interval based on existing sequence annotations.
The software RNAsalsa [ 56] is a new approach to align structural RNA sequences based on existing knowledge about structure patterns, adapted constraint directed thermodynamic folding algorithms and comparative evidence methods.
Therefore, a Random forest (RF) classifier was trained on two sets of anammoxosomal (set A) and cell-envelope (set P) protein sequences, constructed based on existing experimental evidence and comparative genomics.
Based on existing crystal structures, homology comparison between AMPK sequences from different species, and disorder and secondary structure predictions, we designed the trimmed construct AMPK α1(11-550)-β2(76-272)-γ1(24-327) shown in Figure 2A.
ConoServer, a specialized database dedicated to conopeptides [ 22], implemented a web-based tool (ConoPrec) that guides gene superfamily assignment of precursor toxins by the recognition of a limited number of known cleavage sites (or protease specificities) and a sequence similarity search based on existing conopeptide superfamilies [ 16].
