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BJ improved the annotation of Ostreococcus genes, based on existing annotations and databases search.
This feature allows users to add factor values and characteristics to the SDRF based on existing annotations without repetitive text manipulation.
Such genes could not have been prioritized based on existing annotations, which illustrates the importance of using our set of computational gene function predictions as input.
In our study we utilized the model plant A. thaliana as a test organism to evaluate the performance of the prediction of functions from unassembled RNA short reads based on existing annotations in KEGG.
UO was refined and populated through a combination of literature research on units, based on existing annotations of measurements, as well as assays, personal communications with users of UO, as well as the domain knowledge of the ontology developers.
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Based on existing annotation of modules associated with vesicle transport, any relationship (edge) between two members of the same module is considered "true", all other relationships "false".
For each pair of overlapping genes in one genome, e.g. human, spatial relationship of their orthologs in the other six genomes was checked based on existing annotation.
Because they are designed based on existing genome annotations, gene expression microarrays cannot facilitate the discovery of unannotated genes.
To create the reference proteomes for both viruses, their viral DNA sequences were assembled and genes were identified based on existing NCBI annotations for cowpox viruses.
sRNAFinder also makes use of the SCFG (Stochastic Context Free Grammar) model used by QRNA and transcript expression profile from microarray data; it predicts the probability in confidence of interval based on existing sequence annotations.
We first need to identify all the genes with similar mRNA expression to a given query gene based on the brain image at a particular slide location, and analyze the resultant gene list for any statistically significant functional enrichment based on existing biological annotations in the literature or gene ontology databases.
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based on existing genes
based on existing data
based on existing assessments
based on existing settlements
based on existing creatures
based on existing priorities
based on existing methods
based on existing books
based on existing sources
based on existing terms
based on existing comorbidities
based on existing targets
based on existing texts
based on existing formulations
based on existing reports
based on existing hypotheses
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