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The downloaded data were aligned by PRANK based on each gene name, and then the super gene was constructed as species by each gene in each species.
Epistasis among the genes was extensively analyzed, in addition to the analysis based on each gene.
Epistasis (gene-gene interaction) among the genes was extensively analyzed, in addition to the analysis based on each gene.
Real time PCR primers were designed based on each gene sequence (Table 8) using Primer3 software [ 71].
We examined for each risk factor the relative risks of the individual subtypes based on each gene and identified those that are significantly different for the two subtypes.
As a result, in the analysis based on each gene, trends for association were observed between State Anxiety and the DRD2 -141C Ins/Del polymorphism (p = 0.031, uncorrected), and between Trait Anxiety and the DRD2 Ser311Cys or TH PstI site polymorphism (p = 0.048 and 0.041, respectively, uncorrected).
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We also failed to reject homogeneity of phylogenetic trees based on each mitochondrial gene region independently (p = 0.3) or each nuclear gene region independently (p = 0.07).
The phylogenetic profiles obtained based on each housekeeping gene could then be compared with those obtained using the entire datasets.
ML trees based on each individual gene or the rDNA regions are displayed in Figures 2, 3 and 4 and additional files 2, 3, 4 and 5.
For the Arabidopsis MPSS data generated by Meyers et al. [ 75, 76], a basic query was performed for each gene based on gene "At" number (gene identifier) against the 17 MPSS libraries.
Since four of the five selected genes are highly correlated, the relative risk patterns are quite similar for the analyses based on each of these genes.
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based on each iPhone
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