In the genetic area, relations have been found between autism and schizophrenia based on duplications and deletions of chromosomes; research showed that schizophrenia and autism are significantly more common in combination with 1q21.1 deletion syndrome.
Our approach divided duplicated genes into sets based on duplication type and captured larger gene families as well as smaller, recent duplications.
This process produced a base assembly consisting of 50,146 contigs which were then filtered based on duplication, overlap and size to produce a reference assembly of 27,921 contigs.
Moreover, due to the complexity of the reconciliation model based on duplication, transfer and loss (DTL-reconciliation model), there has been little systematic development of species tree aware methods for handling gene families with transfer.
In Sections 2.1 and 2.2, we describe the parsimony-based model of segmental duplication that is based on duplication distance, introduced in Kahn and Raphael (2008, 2009).
Next, we categorize VM migration techniques based on duplication mechanisms (replication, de-duplication, redundancy, and compression) and awareness of context (dependency, soft page, dirty page, and page fault) and evaluate the various Live VM migration techniques.
To figure out dominant mechanisms of physically relatively distant and/or inverted duplog formation, we examined the evolutionary patterns of positional relationships between duplogs, via cross-sectional analyses based on duplication events (fig. 2; see Materials and Methods for details).
All SNPs were successfully genotyped with an average call rate of 99.5% and reproducibility of 99.8% based on duplication of 2% of the genotypes.
To alleviate such bias, we conducted cross-sectional analyses based on duplication events, by counting each duplication event, instead of each duplog pair, as a unit.
