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Statistical tests and bootstrapping: Assessing the reliability of phylogenies based on distance data.
Phylogenetic trees were constructed based on distance data using the neighbor-joining method (Saitou and Nei 1987) implemented in ClustalX.
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To solve the second problem, a modified algorithm based on distance relations between data and cluster centers is designed to ascertain the actual centers generated by the SC algorithm.
In this method, the sub-watersheds are grouped into successively larger clusters based on distance or similarities between data points.
For solving the matching problem we apply the so-called Hungarian algorithm (e.g. [38]) that efficiently delivers the optimal match between two data sets based on distance values given for each pair of data elements.
Different algorithms, all based on distances between original data and modified data, are introduced in this paper, with the intention of satisfying the benchmarking property.
Charge a reasonable fare based on distance.
It may additionally provide an important component in the development of a full transmission network reconstruction methodology based on genetic distance data.
As noted above, GlCAKlike kinase has been proposed as a Giardia CDK7 ortholog based on JTT distance data [ 38], a relationship not supported by our broader phylogenetic analyses.
Hoeck et al. [ 28] also found that the Española and San Cristóbal populations, although closely related, form two clearly distinguishable clusters based on microsatellite distance data.
Molecular marker analysis, joined to phenotypic evaluation, is a powerful tool for grouping of genotypes based on genetic distance data and for selection of progenitors that might constitute new breeding populations.
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