Sentence examples for based on dissimilarity matrices from inspiring English sources

Cluster analysis and dendrogram tree construction were performed based on dissimilarity matrices with the un-weighted pair-group method using arithmetic averages (UPGMA).

Then, module clustering was process based on dissimilarity matrix with minimum module size setting at 100.

An UPGMA dendrogram, the useful method for narrow genetic distanced accessions, was constructed to determine the genetic relationships among DPRK accessions based on dissimilarity matrix using PowerMarker V3.23 and visualized in Mega5 (Sneath and Sokal [1973]; Tamura et al. [2011]).

Selected top 5 gene pairs based on dissimilarity score ranking are listed in Table 2.

The factorial analysis based on dissimilarity index and the NJ tree are shown in Figure 4.

Based on the dissimilarity matrices and the correlation analyses, it appears that the community composition of the effluent is similar but not identical to the community composition of the granular sludge.

Similar to the simulation studies, we used UPGMA to cluster the samples based on the dissimilarity matrix, as defined by different dissimilarity measures based on sequence signatures, and we assessed how well the resulting cluster tree revealed the underlying 3 groups by the parsimony test.

Based on the dissimilarity matrix Fig and UP105 showed maximum dissimilarity (93.8%) and Fig and Ficus showed the least (38%).

GAP is implemented here as an unsupervised clustering algorithm to visually categorize all subjects based on the dissimilarity matrix, which is derived from calculating the pairwise dissimilarity of heart rate dynamics among subjects using the IBS method.

A hierarchical cluster of genes is created based on a dissimilarity matrix and finally, gene co-expression modules were defined from the cluster dendrogram at a threshold of 0.2 dissimilarity value using the dynamic tree-cutting algorithm.

An unweighted neighbor-joining (NJ) tree was built based on this dissimilarity matrix.