Sentence examples for based on coordinates of from inspiring English sources
Nimblegen probes and transcripts from ENSEMBL (version 46) and RefSeq (UCSC MM8) were mapped based on coordinates of the mouse genome assembly MM8.
2. Assignment of each EST to a corresponding gene based on coordinates of the homology region present in the BLAST output file.
Briefly, we first extracted protein coding gene sequences from the M. lychnidis-dioicae genome sequence based on coordinates of gene models, and added 100 bases of flanking sequence on each side to approximate UTRs.
Briefly, we first extracted protein coding gene sequences from the W. dermatitidis genome sequence based on coordinates of gene models and added 100 bases of flanking sequence on each side to approximate UTRs.
Data on population counts and cancer cases by sex, 5-year group of attained age, and socioeconomic status were aggregated into 2 km × 2 km squares based on coordinates of the residences in the beginning of both follow-up periods.
In the study presented here we have focused on gene-centric bins, but this could be expanded to include bins based on coordinates of known conserved non-coding regions or functional pathways as the functional unit for analysis.
The site of IPS stimulation was localized based on coordinates from a meta-analysis of fMRI studies of numerical representation (Cohen Kadosh et al. 2008).
When the comparison was made based on coordinates alone, about 81%% of our CF variants were found to be shared with the already known InDels.
The idea is based on coordinate invariance of Maxwell's equations on which the space of light can be squeezed and stretched by producing a desired spatial and right distribution of the permittivity and permeability through conformal transformations [58].
This tool parses the structure coordinate files, removes the hetero atoms and water molecules, and predicts the interaction based on coordinate distance between atoms of amino acid residues of small peptide and the protein.
Based on coordinate transformation, triple vector product of differential geometry, and theory of conjugate surfaces, equation of meshing is derived.
