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Peak-based meta-analyses are based on coordinates from published studies rather than raw statistical brain maps (42).
The site of IPS stimulation was localized based on coordinates from a meta-analysis of fMRI studies of numerical representation (Cohen Kadosh et al. 2008).
Similar results were seen when we simulated an early-stage reference by splitting the GRCm38/mm10 genome into a scaffold of the 403 chromosomal Giemsa bands (based on coordinates from the UCSC genome browser [ 28]), and realigned our libraries to this new reference version (see Additional file 5: Figure S4).
Specifically, in order to provide further evidence for the plausibility of the present results using the fixation-related analysis approach, we conducted an ROI analysis based on coordinates from the literature (Brem et al. 2006; Vinckier et al. 2007; Van der Mark et al. 2009, 2011; Richlan et al. 2010; Schurz et al. 2010; Szwed et al. 2011).
To confirm that activity within the network was consistently present in our data, we defined a fronto-parietal cortical area comprising these regions (x: 8 −32, y: 0 −50) based on coordinates from Haslinger et al. (Haslinger et al. 2001) and conducted source analysis using BESA's multiple source beamformer (BESA, Graefelfing, Germany).
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CRM1TR and CRM4TR schematics were generated using Fancygene [ 64] based on coordinates determined from multiple sequence alignments.
The location of the ROI for the preSMA was based on coordinates taken from functional activations reported in a previous study (Nachev et al. 2005) and the anterior portion of the BA6 histological region.
CRM1TR and CRM4TR monomers were extracted from RefGen_v2, using custom perl script, based on coordinates in the BLAST output file.
Nimblegen probes and transcripts from ENSEMBL (version 46) and RefSeq (UCSC MM8) were mapped based on coordinates of the mouse genome assembly MM8.
These studies deal with transport methods based on coordinated pushing.
Shannon determined that based on GPS coordinates from the 1994 Deepquest expedition, "at least one-third of the two acres of immediate wreckage containing the two major portions of the vessel is in U.S. waters because of an error in the position of the U.S. Canada boundary line shown on official lake charts".
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com