Sentence examples for based on conserved sequence from inspiring English sources
By defining the P. aeruginosa core genome based on conserved sequence rather than conserved genes, potential bias introduced by gene-calling was eliminated and non-coding regions were also included in the defined core genome [ 71].
The largest number of dockerins (96) are clustered into group 1 (Fig. 1), which is further divided into four subgroups (a d), based on conserved sequence features which distinguish the dockerins in each group.
In CHS, the 5' UTR is very short (∼100bp) and we were able to identify the TATA box based on conserved sequence across the Brassicaceae (TTATATA) at 111 bp from the start codon [20].
As expected, some of the 14 predictors used similar algorithms or pattern information, From s1 to s9, the predictors were trained or based on the amino acid features; the methods of s10 to s13 are based on conserved sequence features or orthologous mapping.
Additional primers were designed to genes of interest based on conserved sequence identified in related species.
Thus we classified NA-DNATs based on conserved sequence motifs in their TIRs and assigned them to corresponding superfamilies.
Sixteen species-specific probes and 9 sets of specific primers were designed based on conserved sequences of these viruses in the GenBank database.
We designed new primers based on conserved sequences of the second and third exon for use in a range of Aroid taxa to amplify and sequence the second intron.
The AtWAKL10 protein was previously identified as a candidate GC molecule using a 14 aa long search motif that was designed based on conserved sequences in the catalytic centers of GCs from lower and higher eukaryotes [17] (Figure 1A).
To test this, a pair of primers based on conserved sequences in melD1 and melD2 was used to attempt isolation of partial melD sequences from six Streptomyces species, S. antibioticus, S. lividans, S. lipmanii, S. maritimus, S. rochei, and S. tanashiensis, by PCR.
