Sentence examples for based on conserved indels from inspiring English sources

This is supported by phylogenetic inferences based on conserved indels, which place Fusobacteria at an intermediate position between Gram-positive and Gram-negative taxa [ 61].

In phylogenetic trees based on 16S rRNA [ 2, 41], various proteins [ 42, 43], and in analyses based on conserved indels [ 44], δ-proteobacteria generally branch in close proximity to the ε-proteobacteria.

A close and specific relationship of F. succinogenes to the Bacteroidetes and Chlorobi groups was strongly suggested by our earlier work based on conserved indels in different proteins [ 30].

Phylogenetic studies based on 16S rRNA and many other genes [ 2, 43, 45, 50], as well as our studies based on conserved indels in several proteins that are present in various α-proteobacteria but absent in Rickettsiales as well as other groups of bacteria [ 17], provide evidence that the Rickettsiales comprise the deepest branching group within α-proteobacteria.

To properly evaluate the results of such studies, it is necessary to carry out these studies in conjunction with phylogenetic as well as other forms of analyses (e.g. studies based on conserved indels), where it is possible to establish a rooted relationship among different groups or taxa under consideration [ 23, 26, 59].

The phylogenetic reconstruction was based on conserved domains.

The deeper branching and distinctness of Bradyrhizobiaceae and Methylobacteriaceae from other Rhizobiales is also strongly supported by phylogenetic analyses based on different gene sequences and conserved indels in many proteins [ 1, 17, 45].

Phylogenetic analysis based on a number of gene sequences as well as conserved indels in a number of proteins (viz.

On the other hand, conserved INDELs of defined sizes are not greatly affected by such differences in evolutionary rates [ 14].

Functional studies on these proteins and conserved indels should reveal novel biochemical or physiological characteristics that are unique to these groups of epsilon proteobacteria.

Conserved residues are shaded by different intensities based on conservation level in the alignment.