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Based on complete DNA sequences of the small subunit ribosomal RNA (SSUrRNA) gene, partial sequences of cysteine protease, ookinete surface protein and cytochrome b genes, Win et al. (2004) compared P. ovale isolates from Myanmar, Indonesia and sequences available from GenBank.
A third genotyping strategy was based on complete DNA sequences of 5 viral glycoprotein genes (gH, gI, gL, gB, and gE) and ORF62 major transactivator gene.
Based on complete DNA sequence information, these results support a close affinity between the small dog haplotype and those of Middle Eastern grey wolves.
In this report, the genotyping scheme based on complete DNA sequences of five viral glycoprotein genes and the IE62 major transactivator gene or ORF22 was used to classify 44 different VZV isolates collected in Hefei, a city in the central Eastern part of China.
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Ascaridida, Oxyurida, and Spirurida (the sampled clade III taxa) do not form a monophyletic group based on complete mitochondrial DNA sequences.
Phylogenetic grouping after alignment of the DTSsa and pTSsa transposon sequences based on complete or nearly complete DNA sequence [ 28] is shown in figures 1A and 1B.
Nonetheless, phylogenetic reconstruction based on complete organellar sequences may facilitate the detection of such phenomena, by reducing errors and uncertainty due to insufficient sampling of DNA sequence.
Results are based on complete cases only.
All analyses based on complete data.
The above figures are based on complete case analysis.
All other values are based on complete (non-imputed) data.
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