Sentence examples for based on comparative genomics from inspiring English sources

In addition, they are one of the very few recipients currently funded by the Natural Science Foundation of China (NSFC) to work on SB-related projects, including a project on minimal genome research that is based on comparative genomics and large-scale deletion of genome fragments.

We characterized a high copy Stowaway family MITE, named as BRAMI-1, in three Brassica crops and showed its putative role in the evolution of the highly duplicated Brassica genome based on comparative genomics analysis.

We are particularly interested in assessing niche adaptation and in investigating the pathogenic potential of the strain analyzed based on comparative genomics against other complete genomes within the SBSEC.

To assess gene loss based on comparative genomics, the Micromonospora sp. L5 genome was used as the reference sequence for the pair-wise RSD test of orthology in 27 representative Actinobacterial genomes, including both Salinispora spp. Four of 430 genes with predicted orthologs in at least 24 of the 27 genomes are absent in both Salinispora sequences (Additional file 2).

Recent studies have shown that 15% of the rice genome has undergone intersubspecies nonreciprocal recombinations between O. sativa japonica and O. sativa indica, based on comparative genomics studies of the varieties Nipponbare and 93-11 the genome of which is available (Wang et al. 2008).

Candidate genes were selected based on comparative genomics and gene expression analysis, which we evaluated with association and linkage mapping.

In the first part, the conserved pathway maps among many genomes are determined, based on the comparative genomics.

Based on the comparative genomics analysis alone, one could hypothesize that FrRUNT is simply a derivative form of RUNX2, i.e. the ortholog of zebrafish RUNX2A.

Based on the comparative genomics of a large number of bacterial genomes, we postulate that bacterial specialization is a one-way irreversible and converging journey causing massive gene loss.

The availability of complete genome sequences of Brassica oleracea and Brassica rapa provides an important opportunity for researchers to identify and characterize NBS-encoding R genes in Brassica species and to compare with analogues in Arabidopsis thaliana based on a comparative genomics approach.

More recently, several entirely different approaches, based on the comparative genomics of gene content, protein content, protein domain content and the organization of protein domains, have been undertaken for determining the root of the evolutionary tree.