Sentence examples for based on codon conservation from inspiring English sources
These methods demonstrate that log odds ratios based on codon conservation can be used to indicate the possibility of a coding region existing in the alignment of human and mouse sequences [ 15, 16].
All three were predicted to be low expressed based on codon usage by the PLS model.
COrrespondence Analysis of codon usage (COA) was calculated based on codon usage as well as Relative Synonymous Codon Usage (RSCU).
The codons for sTfR were optimized using human preferred codons based on Codon Usage Database (Kazusa DNA Research Institute, Japan).
(V2) VIABLE High confidence for viable mutations (novel codon predictions) is assigned based on codons observed in the expanded library (eg, DENV-1234 codon frequency matrix; Observation O4).
The distribution of nucleotides around editing sites in lower and higher plant chloroplasts was examined within codons, and a detailed analysis of the effects on codon changes and usage was developed (Tillich et al. 2006), and a model for the evolution of RNA editing based on conservation of codon usage was proposed.
Sequence or structure conservation-based methods are based on sequence/structure conservation as techniques to find miRNAs.
Additionally, translation stop-codon readthrough predictions based on the conservation of protein-coding signatures were incorporated (Jungreis et al. 2011).
Regardless, some genes appeared to overlap based on the conservation of their open reading frame sequences and the lack of a potential abbreviated stop codon.
One common numerical method for nonlinear conservation laws is the finite volume method (FVM) based on local conservation principles [16].
