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Evidently caution is needed when considering the IM migration estimates and other parameters given that they are based on coalescence simulation of a single locus.
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We simulated the spatially explicit neutral model in infinite area [27] with simulation procedures based on coalescence as described in [29].
Finally, Bayesian maximum-likelihood method based on coalescence implemented in CoNe [ 40] was employed.
First, alternative connections between haplotypes were broken following a series of rules based on coalescence theory [ 90].
The analyses are based on coalescence, but to increase clarity estimates of m 1 and m 2 are reported in forward-time.
We investigated the demographic profiles of chicken populations based on coalescence theory and analyzed pairwise mismatch distribution to confirm the population expansion [ 39], using Arlequin.
This conclusion, however, is based on coalescence estimates with considerable variation and a small number of comparisons, and should, therefore, be interpreted with caution.
However, we omitted the locus from analyses based on coalescence (MIGRATE and IMa), where selection at a locus could result in seriously misleading outcomes.
When dealing with coalescent-based inference, we rely on simulating genetic data based on a coalescence model and computing summary statistics from simulated datasets.
A discretized population-balance approach based on a coalescence model is presented in this paper.
Based on the coalescence model, expanding the set of genomes by sequencing additional B. burgdorferi s.s.s
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