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In all these proteins, HHpred identifies several conserved blocks including the characteristic glycine-rich loop, based on both secondary structure and sequence conservation.
Although U4atac and U6atac are quite diverged compared to known homologs, they can be recognized unambiguously based on both secondary structure and conserved sequence motifs.
The reannotation of the mtDNAs of the ants allowed the identification of the correct position of trnN through comparisons based on both secondary structure and sequence analysis with a broad array of homologous counterparts (see Results and Discussion).
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These residue assignments are based on both the secondary structure predictions from PSIPRED online server (McGuffin et al, 2000; Figure 5F) and our cryo-EM density map.
The study was conducted since 2015, based on both primary and secondary data.
Based on both primary and secondary data, we find that mutual monitoring can improve the effectiveness of a water allocation and trading program.
Methodology The study is based on both primary and secondary data.
Methodology: The assessment is based on both primary and secondary data/information.
We discuss representatives of 23 types of ncRNAs that were detected based on both sequence and secondary structure homology.
The ITS2 sequences with the secondary structure format were aligned using the MARNA web server (http://biwww2.informatik.uni-freiburg.de/Software/MARNA/index.html) [87], based on both the primary and secondary structures.
As microbial distribution is a result of both environmental and dispersal processes [27], it remains unclear how these taxonomically closely related bacterial strains dispersed around the globe while two isolates from the same area are phylogenetically distinct from each other based on both housekeeping genes and secondary metabolic genes.
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