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More importantly, the IND-00 CHIKV strain, which is almost 100% identical to the Ag41855 strain based on both nucleotide and amino acid sequences, has a glutamic acid residue at E2-60.
These searches were based on both nucleotide and amino acid sequences and included EST and trace records from cyclostomes, cartilaginous fish, teleost fish, and tetrapods.
The phylogeny was reconstructed using the maximum parsimony (MP) and Bayesian inference (BI) methods based on both nucleotide and amino acid sequences.
This topology was also supported by the neighbor-joining (NJ) tree (Saitou and Nei 1987) method based on both nucleotide and amino acid sequences in the region, although bootstrap values of their groups were not high.
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The genetic relatedness between barley and other Triticeae species, especially wheat, is well confirmed based on both genetic nucleotide sequences and intergeneric hybridization.
Mutation maps based on both protein and nucleotide sequences are available for each protein.
To infer when OsCEP5 and OsCEP6 emerged in the evolutionary history of plants, maximum likelihood phylogenetic genes of all CEP genes identified in this study were reconstructed based on both AA and nucleotide sequences.
The fungal culture FVP4 was selected and identified based on both microscopic morphology and nucleotide sequence analysis.
Partitioned phylogenetic analyses, based on both amino acids and nucleotides of the protein-coding genes plus the ribosomal RNA genes, retrieve significant support for a monophyletic Diplura within Pancrustacea, with Projapygoidea more closely related to Campodeoidea than to Japygoidea.
Furthermore, the clades found in the trees based on nucleotide sequences (both MP and SW) are very similar to those found in the MP trees based on translated amino acid sequences (MP-AA; Figure 7).
The data are useful for assessment of sensitivities based on single nucleotide polymorphisms (SNPs) in both population and basic science gene environment projects.
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