Sentence examples for based on available sequence from inspiring English sources

In organisms with unknown genome sequence, designing of mRNA-specific PCR primers based on available sequence information of other species is an extremely useful approach to isolate homologous/orthologous genes.

Note that based on available sequence annotations divergent N-terminal and C-terminal regions were clipped from the alignments.

Based on available sequence information 89% of the probes are common to the 4 strains used for the design, whereas 11% are strain-specific capture elements.

Based on available sequence data, the most acceptable explanation for this question is that these 79 sequences may be genomic contaminations primarily coming from prokaryotes.

Based on available sequence information it was not possible to determine with absolute certainty whether VvSTS1, VvSTS3, VvSTS4, VvSTS8, VvSTS12, VvSTS13 or VvSTS25 encode a complete ORF.

Based on available sequence data, it currently encompasses 57 cultured strains and 180 cloned sequences and displays 4.1%16S6S rRNA divergence.

The primers were designed based on available sequences (Table 1) using Primer3 software [ 36].

Based on available sequences (pRUM [ 31] or composite (vanB) transposons [ 32]) we established PCR primers for an IS 16-specific internal fragment (547 bp).

A core domain commonly shared by EPKs and ELKs was defined based on available sequences and crystal structures (see Methods and Fig.  1).

Methods and Results: Internal primers were designed based on available sequences of the plastid ndhF gene and the rpl32-trnL intergenic spacer region, and the nuclear gene PepC.

In addition, for loci combining indels and microsatellite motifs (loci 10, 11, 54 and 57), we separately coded the two types of characters based on available sequences for these loci.