Sentence examples for based on annotation and from inspiring English sources

Ewen-Campen et al. reported their singletons to be highly redundant based on annotation, and employed a secondary CAP3 assembly strategy for them.

Data was chosen based on annotation and experimental conditions that referred to a hormone or hormone inhibitor treatment vs. a relative control, with only replicated data used for biclustering analysis.

These transcripts were pooled from clusters III, IV and V, with each individual transcript then allocated a functional category based on annotation and literature searches Primer sets used and the product sizes obtained in addition to the acquisition temperatures used.

In our study, we mainly focus on results from one probe, ILMN_2298727, that is both informative and does not have a variant in its sequence based on annotation and genotyping.

However, cancer driver mutations have particular characteristics that Kaminker et al. (2007a) exploited with the CanPredict algorithm to distinguish cancer mutations from others based on annotation and sequence features.

It is not possible to establish a function based on annotation, and, in some cases, even to find homologues for a number of genes induced during organogenic nodule formation.

In the wild banana genome databases, 15 sequences in 'DH-Pahang' (AA group) and 14 sequences in 'PKW' (BB group) were identified in silico as SOD genes based on annotations and a BLASTn search using known SOD genes from NCBI.

We have examined several methods for grouping GO categories when assigning SWs including grouping by (i) GO hierarchy (i.e. BP, CC and MF) (ii) GO hierarchy and number of annotations (iii) clustering of GO categories based on annotations and (iv) ancestor and descendant terms with ancestors having a maximum category size (300 annotations).

Based on Annotation, Visualization and Integrated Discovery (DAVID) analyses, 280 hypermethylated DMGs participated in 66 biological processes, and 35 terms of which reached significance (p < 0.05, Additional file 5).

Finally, significant probe-sets were collapsed to well-annotated genes, based on annotation provided by Affymetrix, and then subjected to literature analysis through PubMed.

The annotation of gene positions and lengths in the two T. cruzi maxicircles based on annotation of T. brucei and L. tarentolae is listed in Table 1.