Sentence examples for based on alignments and from inspiring English sources

The region was selected based on alignments and propensity scales.

Our initial inspection of these loci was based on alignments and analyses of Drosophila and vertebrate conservation available through the UCSC genome browser.

The boundaries were determined based on alignments and secondary structures of rRNA sequences of other mite species.

The boundaries were identified based on alignments and secondary structures of rRNA genes of other mite species.

The locations of the two rRNA genes (rrnL and rrnS) were determined based on alignments and secondary structures of rRNA sequences of other hemipteran species.

Based on alignments and comparisons of complete mitochondrial sequences of flatfishes, dozens of primer pairs were designed for amplification of the mtDNA genomes (Additional file 1: Table S1).

In this paper we focus on a rapid and reliable procedure for classification of autonomous non-LTR retrotransposons based on alignment and clustering of their reverse transcriptase (RT) domains.

The first method was based on alignment and assembly using reference genomes from two strains within the subspecies tularensis type A1, FSC198 [7] and SCHU S4 [9].

A core-gene tree, based on alignment and a pan-genome tree based on gene presence/absence, maps the relatedness of the 186 sequenced E. coli genomes.

Based on alignment and phylogenetic reconstruction of conserved tRNA regions, we identified major CanSINE lineages defined by distinct motifs, which we have designated as subfamilies and subtypes.

The remaining 670 genes that were expressed at a level of RPKM of five or more but had no primary TSS were assigned to operons based on alignment and proximity to genes with a primary TSS.