Sentence examples for based on alignment and from inspiring English sources
In this paper we focus on a rapid and reliable procedure for classification of autonomous non-LTR retrotransposons based on alignment and clustering of their reverse transcriptase (RT) domains.
The first method was based on alignment and assembly using reference genomes from two strains within the subspecies tularensis type A1, FSC198 [7] and SCHU S4 [9].
Instead, our knowledge of the substrate specificity has largely been based on alignment and comparison of naturally occurring processing sites of TEVp as well as cleavage analysis of substrate variants representing a relatively limited set of amino acid replacements at relevant positions within the TEVp substrate consensus sequence, ENLYFQG [25], [26].
Based on alignment and phylogenetic reconstruction of conserved tRNA regions, we identified major CanSINE lineages defined by distinct motifs, which we have designated as subfamilies and subtypes.
A core-gene tree, based on alignment and a pan-genome tree based on gene presence/absence, maps the relatedness of the 186 sequenced E. coli genomes.
The remaining 670 genes that were expressed at a level of RPKM of five or more but had no primary TSS were assigned to operons based on alignment and proximity to genes with a primary TSS.
Our initial inspection of these loci was based on alignments and analyses of Drosophila and vertebrate conservation available through the UCSC genome browser.
The boundaries were determined based on alignments and secondary structures of rRNA sequences of other mite species.
The locations of the two rRNA genes (rrnL and rrnS) were determined based on alignments and secondary structures of rRNA sequences of other hemipteran species.
