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The set of genotypes used for the polymorphism survey in this study was based on a germplasm panel of 18 genotypes described in Blair et al. [ 22] as panel I.
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The value of delta K in structure analysis from K = 1 to K = 10 based on (A) DPRK germplasm, (B) Mini-Rice Diversity Panel and (C) combined DPRK germplasm and Mini-Rice Diversity Panel. Figure S2.
Based on a rich natural germplasm resource, we selected six pairs of Miscanthus samples with different cell wall compositions.
(A) Unrooted genetic tree based on neighbor joining and (B) Principal component analysis based on DPRK rice germplasm and Mini-Rice Diversity Panel.
Our investigation was based on a set of 4 149 maize inbred lines representing elite European and North American germplasm.
The selection of tomato in cultivation is based on a small set of domestication genes causing little genetic variation in the tomato germplasm [ 50].
Popluechai et al. [ 5] assessed genetic diversity of nine germplasms of pineapple and divided them into three groups based on a 0.77 similarity coefficient.
Kojima et al. ([2005]) detected 554 alleles from 332 accessions of cultivated rice based on a genome-wide RFLP survey, and developed a rice diversity research set of 69 accessions of germplasm, including two reference varieties, Nipponbare and Kasalath.
Apart from the conventional QTL mapping, which was typically based on a segregation of resistance in narrow genetic backgrounds, GWAS captures simultaneously the vast genetic variation existing in soybean germplasm.
We were interested in the question to what extent our SNP collection, which is based on a limited number of genotypes, can be applied for variety identification, phylogenetic analysis, genetic mapping, evaluation of introgressions and germplasm identification.
"Based on a T.R.U.
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