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The main contribution of this article is extending ANOVA test for fuzzy observations based on a distance between symmetric fuzzy numbers.
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The scoring of the distance-based scheme was based on a distance criterion between the residues at these positions.
To visualize categorical enrichments, we used multidimensional scaling to calculate an optimal 2D arrangement of categories based on a distance matrix of between-category semantic scores using "makeDendrogram.py" (pyEnrichment) and scripts provided by Daniel Runcie (personal communication).
HBOND identifies all possible hydrogen bonds based on a distance criterion (3.5Å between donor and acceptor).
Newick trees were created using the PHYLIP software package [ 14, 15], using the neighbor program to generate the trees based on a distance matrix of pairwise distances between the genomes.
HBOND identifies all possible hydrogen bonds based on a distance criterion; 3.5 Å between donor and acceptor except for interactions involving sulphur atoms where 4.0 Å is used.
In 25 of these N. furzeri transcripts, we established informative markers, the selection being based on a distance of c. 1 Mb between these transcripts in the medaka interval.
All the trajectories were analyzed for the presence of hydrogen bonds between all possible donors and acceptors based on a distance cut-off of 3 Å between the donor and acceptor, and an angular cut-off of 120° between donor-H-acceptor.
The measurement potential is based on a quadratic distance between the estimated disparity value and the seven measured ones.
Finally, the generic nature of SimAttack based on a similarity distance between pre-built user profiles and a query allows an adversary to design attacks for others private Web search solutions.
The clustering is based on a Levenshtein distance between CDR3 sequences that further takes into account the VJ assignation produced by iHMMune-align.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com