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The model was applied to produce sequence based descriptors of four classes of transmembrane helix‐helix contact site configurations.
Graph theory based descriptors of proteins have gained prominence in recent times and have been shown to be ideally suited for studying general topological principles of protein structures [16].
Smith and Teal [19] implement a similar approach using a histogram-based descriptor of the appearance of the sea.
The codebook is constructed by clustering LQP based descriptors from a set of natural images instead of distorted images, which presents strong generalization ability.
This includes both the use of feature based descriptor sets [38] and physicochemical descriptor sets [9, 18, 39].
The feature based descriptor only codes for presence or absence of features.
This fragment dictionary based descriptor encodes for every structure, which of 512 predefined fragments are present in it.
A final option could be the usage of chemogenomics based descriptors.
The experimental properties of the AunSi (n=1-8) nanoalloy clusters are correlated in terms of DFT based descriptors viz.
All equations based on descriptors of the same categories used quantum-chemical descriptors, and in particular EHOMO and ELUMO.
For all hairpin sequences from an input sequence, a miRNA likelihood score L is calculated, given an underlying scoring model based on descriptors of the physical and sequence characteristics of miRNAs (Table 1; [see Additional file 1]).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com