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We used genes that are known to be associated with malaria as the seeds and applied a random-walk based algorithm to rank genes in the cross-species network.
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Essentially, this study uses a PageRank-like iterative eigenvalue algorithm to rank doctoral programs, based upon the placement of graduated candidates into positions with academic institutions.
Guyon et al.[ 26] proposed the SVM-RFE algorithm to rank the features (enzymes) based on the value of the decision hyperplane given by the SVM.
While Dorsey explained that Twitter has its own algorithm to rank particular tweets and accounts and to minimize the appearance of harmful and hateful ones, he maintained that the company's sorting isn't based on political ideology.
We will keep updating our algorithm to rank candidate gRNAs.
We used a random-forest based algorithm, Boruta39, to assess the relevance of each feature by ranking them based on their predictive importance (Fig. 2a) (Methods).
BioDiscovery's SNP-Rank Segmentation algorithm with Quadratic Wave Correction, a statistically based algorithm similar to Circular Binary Segmentation (CBS), was used to make copy number and loss of heterozygosity (LOH) calls [ 29].
By using a random walks based algorithm we were able to encode the structure of the underlying transcriptionally regulated networks in this ranking.
Among existing ranking algorithms, link analysis based algorithms have been proved to be effective for ranking documents retrieved from large-scale text repositories such as the current Web.
Colleges would use their own internal algorithms to rank students (much like students are ranked internationally at much larger systems).
For example, the Pagerank algorithm underlying the popular search engine Google is based on eigenvector centrality to rank the web pages (Page et al., 1998).
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CEO of Professional Science Editing for Scientists @ prosciediting.com