Sentence examples for base positions within the from inspiring English sources

If mutation bias variation patterns do occur, they should affect all base positions within the gene, including coding and non-coding sequences.

GERP scores were cataloged for all base positions within the position weight matrix, and binding sites harboring motifs were compared across tissues to determine tissue specificity.

Linear interpolation was used to estimate the fold enrichment at each base position within the window.

Statistics reported include the overall mismatch, insertion, and deletion error rates; the error rate for each nucleotide; and the error rate by base position within the read.

To estimate the sequencing-error rate as a function of base position within the read, we compute read read overlaps that are seeded by short exact matches.

Finally, flow cell lane, machine cycle (base position within the read), sequencing context (preceding and current nucleotide) or other technical aspects may influence base quality scores, which help characterize the quality of the bases in the individual reads.

In contrast, Illumina v4 exhibits a strong influence of base position within the read on error rate, characterised by sudden peaks and a marked increase in error rates near the end of the read.

Database URL: http://cgd.jax.org/cgdsnpdb/ Single nucleotide polymorphisms (SNPs) are variable single base positions within a genome that represent the simplest and possibly most common type of genetic variation.

We further investigated the variations between these base positions within our V. parahaemolyticus isolates.

This second type of alleleSNP indicated base positions within Maxxa and TX2094 that were heterozygous.

To maximize specificity for very low-level variants, base positions within or immediately adjacent to poly-mononucleotide tracts were excluded from analysis.