Sentence examples for base pathway from inspiring English sources

We developed a web-based application, the Pathway Distiller (http://cbbiweb.uthscsa.edu/PathwayDistiller), which provides access to our integrated pathway database base, pathway enrichment and three methods of pathway consolidation.

In this manner we created two clusters of 4 scenarios each (see Table 1, details for the calculated convex base pathway activities for all scenarios are given in Additional File 1, Tables 2S to 9S).

(B) KEGG based pathway enrichment analysis of the significantly altered gene sets (green: down regulated genes; red: up regulated genes) in WRN -/- MSCs upon VC supplement.

Since phosphocholine can be incorporated directly into phosphatidylcholine [ 33], the substrate for PLA2, the relatively low abundance of cellular phosphocholine pools early in the time course might reflect increased flux through the phosphatidyl-base pathway to lysoPC, which has been implicated in pH signaling in elicitor-treated Eschscholzia californica cells [ 34].

First, we define the single-gene based pathway activation metric.

Non-biochemically based pathway prediction systems use statistical inference methods to generate reactions between compounds [ 57].

Here, we are presenting some details of biochemically based pathway prediction systems.

Various algorithms, such as gene set enrichment analysis (GSEA) [ 16, 17] and structural information based pathway analysis [ 18], have been developed to identify biologically relevant pathways.

To further explore the immune response profiles induced by WED immunization to the level of a single pathway, we used the KAAS web-based pathway analysis program.

By applying the ORA based pathway analysis for DCM we detected association signals to be enriched in different pathways indicating their modulation by common variants.

The genomic data serve as a foundation to understand the interrelationship between transcription factor and chromatin based pathways.