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Complete mitochondrial CR sequences (1183 base pairs) were generated for 838 marine iguanas (most of which were also analyzed for microsatellite loci).
Paired-end shoreadsads of ~100 base pairs were generated for four samples (ER18, 16D, selected pool and unselected pool).
Overlapping PCR fragments of approximately 2000 base pairs were generated using DEN-2 specific primers and Advantage cDNA polymerase (ClonTech, Palo Alto, CA).
Approximately 50 70 million reads with an average read of 51 base pairs were generated for each replicate sample and used for further analysis.
Products ranging from 200 to 500 base pairs were generated to screen the exons of TERF2IP, TERF2, LRRC29 and FBXL8 (4, 10, 4 and 6 products, respectively).
Models of the complexes formed by interaction of JAZ ZF2 (homology modeled using the Phyre webserver), JAZ ZF3, and ZFa ZF1 with a minimal binding sequence of A-form dsRNA (determined during the NMR experiments to be 19 base pairs) were generated using HADDOCK version 1.2.
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A histogram of the distances between every + strand read and − strand read in a window of 300 base pairs was generated and the average fragment size was determined by summing the distances weighted by their abundance.
The images of optimized base pairs are generated using Pymol from the available coordinates of the optimized geometries.
The occurrences and the frequencies of oligonucleotides from one to 50 base pairs are generated and accumulated from each of the complete genome sequence.
A PCR product of approximately 250 base pairs was generated from the wild type gene, whereas the disrupted gene generated a product of approximately 1000 bp as detected by ethidium bromide staining of 1 % agarose gels.
SNP pairs were generated based on gene annotation, pathway, and network knowledge, respectively.
More suggestions(16)
base pairs were scored
base pairs were purified
base pairs were interrogated
base pairs were simulated
base pairs were regarded
base pairs were added
base counts were generated
base pairs were sequenced
base pairs were excluded
base pairs were masked
base pairs were predicted
base pairs were processed
base pairs were coded
base qualities were generated
base pairs were tested
base pairs were perturbed
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