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Exact(10)
Within clade sequence divergence was small, with 0-3 base pair differences between the different strains of F. fomentarius from Northern European countries.
There were only a few base pair differences between Z. luxurians and Z. nicaraguensis.
Finally, the frequency of base pair differences between pairs of actinomycete strains (relative genetic distance) was determined in PAUP* 4.0b 10 [61] and inserted as a continuous covariate in the statistical analyses (Tables 2 and 3; see below).
We observed 1124 base pair differences between Rec-1 (BC313) and WormBase WS190, and 441 between Rec-1 and the wild-type strain VC2010.
The locus-specific primers for these insertions showed base pair differences between the most recent MAGI or FST consensus sequence suggesting that the primers were originally designed from lower quality sequence reads or assemblies.
Using the software programs MAQ and Slider, we observed 1124 base pair differences between Rec-1 and the reference genome in Wormbase (WS190), and 441 between the mutagenized Rec-1 (BC313) and the wild-type N2 strain (VC2010).
Similar(50)
Considering there is only a single base pair difference between t011 and t1254 such similarity is not surprising.
This can be achieved by exploiting an endogenous single base pair difference between the wild-type and mutant transcripts, such that an effective RNAi sequence can be designed with complete homology to the mutant transcript but containing a single nucleotide mismatch with respect to the wild-type.
The manual sequencing method used by Collins et al. when they first described H. kunzii [ 14] could explain this 14 base pair difference between the two sequences.
A distance of one essentially means one base pair difference between the observed structure and the closest point on the boundary of the polytope, which need not be the feature vector of a structure.
Descriptions of the probe to genome alignments are stored in the database as either perfect 'Full match' alignments or 'Mismatch' alignments for those probes that align with only a single base pair difference between the probe and the genome sequence assembly.
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