Your English writing platform
Discover LudwigSuggestions(5)
Exact(20)
This site occurs at position 731044 in FTNF002-00 and forms the third base of the codon encoding Alanine-175 in the glucose-inhibited division protein A (FTA_0780).
The base pair location of the novel Premature Termination Codon (PTC) was determined for out of frame, nonsense and frame-shifting point mutations as the final base of the codon using the output from Mutalyzer and confirmed by visual inspection of the dystrophin gene sequence in Alamut 1.5 (Interactive Biosoftware).
The GC3 analyzes the percent of GC in the third base of the codon in each gene.
> -wrap-foot> In 1966, Crick suggested that in some cases wobble pairing may occur in the third base of the codon.
The mutations found on codon 13 corresponded to the transition G → A to the second base of the codon (GGC → GaC, Gly → Asp, G13D).
The mutations found at codon 13 corresponded to the classical transition G → A in the second base of the codon (GGC → GaC, Gly → Asp, G13D) (Table 2).
Similar(40)
I also appreciated the application of principal components analysis on representations of genetic codes based on the "codon distances" of amino acids.
ESTScan v. 3.0.3 [ 26] was used to predict the coding sequences of each contig based on the codon preference matrix of A. thaliana.
In the coding region, the average GC content is 56%, but it would reach 76.8% if only counting for the third base of the codons.
These modifications are all synonymous substitutions occurring only at the third base of the codons (the codon-usage preference in yeast was chosen as described by http://www.kazusa.or.jp/codon/).jp/codon/
To generate ZmDUR3 mod (KJ652243), the nucleotide sequence of the first 216 nucleotides of ZmDUR3 (KJ652242) was modified by substituting only the third base of the codons (highlighted in yellow), with no difference occurring at the amino acid level.
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com