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The "trunk" of the tree was defined as the path from the root to the base of the cluster including the latest (2005) sequences.
Our phylogenetic analysis (Fig 3A) indicates that PFI1360c is most closely related to the PP2/4/6 subgroup, although it emerges at the very base of the cluster, and is therefore relatively divergent from other members of this subgroup.
Most of these groups have one or more C. intestinalis sequence forming a root at the base of the cluster, indicating that these genes evolved before the divergence of these lineages.
The relatively more abundant marine Groups II and III Euryarchaeota (GII/III-Euryarchaeota) are sister clades that branch at the base of the cluster formed by Aciduliprofundum boonei and the Thermoplasmatales.
This trend is clearly visible in Pinus taeda, where Pt11 with a long proline-rich domain is located at the base of the cluster of proteins, which otherwise possess shorter N-terminal domains rich in both glycine and proline.
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Table 2 displays the distribution of injuries referred to our institution based on the cluster of origin.
List of overlap of ECM-related genes based on the cluster analysis.
At the district level, weighting was based on the cluster effect of the sample.
In other words, we learn the behavior of the application based on the clustering of Web server response pages that are similar enough.
Genes were categorized based on the Clusters of Orthologous Groups of proteins (COG) classification (Tatusov et al. 2000).
Wintertime weather regimes over North America based on the clustering of daily geopotential heights at 500 hPa.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com