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The images were further processed for chemical and optical cross-talk, phase errors and read quality before base calling was performed for each template bead.
Base calling was performed under highest effective depth (EBD) at each site, with EBD being the product of the mapping quality and scores for the base under consideration81.
Base calling was performed using CASAVA v1.8.2 and reads were mapped to the hg19 reference sequence using the BWA-backtrack algorithm from BWA v0.7.8.
Base calling was performed with the Agent system (Paracel).
Data was collected with Sequencer Control Software v2.6 and base calling was performed with Real Time Analysis v1.6.
Base calling was performed with PHRED [ 36].
Similar(16)
Signal processing and base calling were performed using the bundled GS FLX software version 2.0.01.
Image analysis and base calling were performed using the Illumina Pipeline (version 1.7).
The image analysis and base calling were performed using the Illumina pipeline with default settings.
Paired-end library preparation, sequencing, and base calling were performed according to the manufacturer's recommendations.
Fragment library preparation, sequencing, and base calling were performed according to the manufacturer's recommendations.
More suggestions(17)
base calling were performed
base calling was conducted
base calling was used
base calling was realized
base line was performed
base calling was done
base actigraphy was performed
base excision was performed
base calling was processed
base calling was automated
base mass was performed
base bias was performed
base calling was completed
base calling was carried
base extension was performed
base section was performed
base hydrolysis was performed
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