Sentence examples for base call for each from inspiring English sources

The output files presented a base call for each nucleotide position and allowed a direct comparison with the reference sequences obtained by Sanger sequencing.

The SAMtools program was used to calculate the per-position coverage and the base calls for each position56.

The pyroluminescence intensity for each bead-containing well was used to determine base calls for each nucleotide incorporation step.

This P-value is computed for each strand separately and by considering the base calls for each pool independently.

The various HTS technologies have different sequencing biases and error rates, and while most HTS technologies sequence the residues of the genome directly, generating base calls for each position, the Applied Biosystem's SOLiD platform generates dibase-coded (color space) sequences.

Using HaplotypeCaller to call variant base calls for each wAnaITG genome of D. ananassae could result in a site being called as a heterozygote either because the two allelic copies of a specific wAnaITG sequence differ, or because the two duplicated regions on the same chromosome differ from each other (much like paralogs of a single gene might differ).

The Di-nucleotide covariate looks for systematic errors caused by a specific previous base call, for example, if calling a G usually makes the instrument more likely to call a subsequent C even if that is incorrect.

The threshold for variation at a specific base in the genome needed for SNP calling was lowered to ≥10% of reads, yielding an aberrant base call for the CEN.PK113-7D CEN.PK113-7Dnt fread≥35% for R57 SNP calignment order to maintain stringency on positive variation calling.

The base call quality for each sequenced read was assessed using the FastQC program (bioinformatics.babraham.ac.uk/projects/fastqc/) (Fig. 2a and Supp. Figs. 1 3).

The Python scripts extract base call counts for each coordinate, discarding indel and read start/end information.

It has seized issues ready-made for its base, calling for France First, or a France for the French, in elliptical anti-immigrant, anti-Muslim language.