Exact(22)
This was confirmed by BESs from these clones showing high BLAST-based sequence similarity to chloroplast genome sequences from Brachypodium, rice, wheat and barley (data not shown).
agriocrithon and wild barley (data not shown).
Initially, hierarchical clustering was performed on the barley data set using these 10,808 probe sets.
These particular wheat data were generated using the same platform technology as with the rice and barley data.
This well-known barley data set was developed by the North American Barley Genome Mapping Project (Tinker et al. 1996).
The rice and barley data are available through the NCBI portal GEO under series GSE13735 and GSE6325.
Similar(38)
We tackle these requirements by applying our approach to a set of barley grain data and demonstrate how this data of one object but of different sources and modalities may be exemplarily brought into context of each other using the described approach.
Overall, the wheat and barley array data show a diverse pattern of caleosin gene expression in various tissues, and represent independent data sets that corroborate some of the tissue-specific caleosin gene expression patterns observed for rye and triticale.
Barley genomic data was downloaded from the web sites ftp://ftpmips.helmholtz-muenchen.de/plants/barley/.
In addition, barley genomic data and gene annotations were downloaded from ftp://ftpmips.helmholtz-muenchen.de/plants/barley/public_data/ [ 52] and ftp://ftpmips.helmholtz-muenchen.de/plants/barley/public_data/ [ 53].
NS computed the genetic map on unpublished barley genotyping data provided in collaboration with RW and TJC.
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