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This may be due to: (i) Non-preferential uptake, (ii) insufficient uptake for balancing sequence loss by mutational decay, (iii) insufficient drive from higher mismatch loads to balance the drive towards lower ones, or (iv) functional constraint selecting against some sequences at this mismatch loads.
By balancing sequence likelihood with species divergence information from the species tree topology, TreeFix-DTL avoids the pitfalls of the existing approaches and finds more accurate gene trees.
A similar format occurs later with a one-legged balancing sequence.
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Our method efficiently models horizontal gene transfers, gene duplications and losses, and uses a statistical hypothesis testing framework [Shimodaira Hasegawa (SH) test] to balance sequence likelihood with topological information from a known species tree.
Balanced sequences appear to have nice correlation properties.
These studies are ideally conducted with serially balanced sequences, in which every stimulus precedes and follows every other stimulus.
Results indicate that repeating cereal crops in the cropping sequence reduces their productivities, while well balanced sequences that include legumes resulted in the highest productivities of cereal crops.
Figure 14 Distribution of the maxima of spectrally balanced sequences with lengths N = 8, 16,..., 1024 ( curves ) and mean values of the distributions ( straight lines ).
As already mentioned in the introduction, we can check in Figure 5 that Slepian sequences or PSWFs are slightly shifted upward as order increases while spectrally balanced sequences have spectra that better occupy the whole bandwidth.
Continuous carry-over designs with serially balanced sequences are argued to be particularly well suited to the characterization of "similarity spaces," in which the perceptual similarity of stimuli is related to the structure of neural representation both within and across voxels.
In practice, the number of samples in each dimension has to be chosen judiciously so as to balance sequencing efficiency with read length after all prefixes to reads (including barcodes and primers) are trimmed off.
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