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I was a bad Muslim for trimming my beard.
And GE Capital began the lengthy process of shedding bad loans and trimming the finance business.
Trimming low-quality regions from such alignments is one possible solution to reduce the number of false positives in adaptive selection tests (Privman et al. 2012), but it has the disadvantage that, as a byproduct of trimming "bad quality" regions, we are also eliminating genuine fast evolving regions that may include true positively selected sites.
Quality filtering was performed with the NGSQC Toolkit (v2.3.1) [ 69] in three steps: 1) removal of reads containing ambiguous bases with AmbiguityFiltering.pl, all settings default; 2) trimming of bad quality bases from 3′ ends with TrimmingReads.pl, -q 28 -n 60; 3) removal of bad quality reads with IlluQC_PRLL.pl, N 5 -l 90 -s 24.
The first two parameters constrain the quality of alignment while the third parameter loosens the constraint to account for insufficient trimming or bad quality bases in the end of contigs, which are likely sequencing errors.
Japan's top three banking groups -- Mizuho, the Sumitomo Mitsui Financial Group and Mitsubishi Tokyo -- all returned to the black for the fiscal year that ended in March and met goals to trim bad loans.
Japan's top three banking groups -- Mizuho, the Sumitomo Mitsui Financial Group and Mitsubishi Tokyo -- all returned to the black in the fiscal year that ended in March and met their goals to trim bad loans.
Hi-Seq2000 reads were analyzed using seq_screads [ 53] to trim bad quality regions.
We used the 'qualityTrimmer' algorithm in the EULER-SR software package [ 63] to remove bad reads and trim low-quality region from reads.
That leaves a number of public defense offices at the whims of state legislators focused on trimming budgets and punishing the bad guys.
Doing all the trimming on one side is is bad practice and may result in the door looking wider on one side than the other.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com