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In our review of the first decade of bacterial genomics, we concluded that the genomic diversity of the bacterial world is far greater than expected (Binnewies et al. 2006).
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It is worth noting but not surprising, that the bacterial-virus world is self-sufficient, because it existed long before us and other higher organisms.
The rise in antibiotic resistance amongst bacterial pathogens around the world is causing alarm, with the possibility of a "post-antibiotic era" in the 21st century [ 1].
Widespread sickness throughout the world is caused by the pathogenic bacterial genus Mycobacterium.
This is not unprecedented in the bacterial world and IS expansions may result from an evolutionary bottleneck due to bacterial population isolation [ 32].
LuxS and AI-2 production are widespread in the bacterial world, and AI-2 is proposed to be an inter-species communication signal.
Ticks in various regions of the world are vectors for bacterial, viral, and protozoal pathogens (5 ).
We have found that, like in the bacterial world, viral ORFans are shorter than non-ORFans on average, and that this difference is statistically significant in the vast majority of individual genomes.
Irrelative of what scenario is correct it seems that RFH did exist in the bacterial world for a long time and is not a result of a recent duplication.
Horizontal gene transfer is recognized as a source of the great plasticity of the gene repertoire at all taxonomic levels in the bacterial world [ 9, 13], but is commonly believed to have little or no impact on the genealogy of the conserved core genome.
The presence of such "junk" DNA is one reason for the vast variation in genome size within the bacterial world, although the genome's size is of course also dependent on the number of functional genes and pathways that are present.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com