Sentence examples for bacterial sequence database from inspiring English sources

We have assembled a viral and bacterial sequence database, which includes all of the complete bacterial and viral genomes of the NCBI Reference Sequence (RefSeq) collection as of May 9, 2008.

TfuDyP was identified by PSI-BLAST searches of the NCBI bacterial genome sequence database.

HotAldO was identified by PSI-BLAST searches of the NCBI bacterial genome sequence database.

The Bacterial Isolate Genome Sequence Database (BIGSdb) platform provides this functionality for WGS data [ 17].

Keith Jolley (University of Oxford, UK) described the freely accessible Bacterial Isolate Genome Sequence Database (BIGSdb; http://pubmlst.org/software/database/bigsdb/).org/software/database/bigsdb/

All genomes were uploaded to the Bacterial Isolate Genome Sequence Database (BIGSdb) supported Cronobacter PubMLST database [ 2, 28]; http://pubmlst.org/cronobacter/.org/cronobacter/

Gene-by-gene population annotation and analysis for whole-genome MLST (wgMLST) was performed using Bacterial Isolate Genome Sequence Database (BIGSdb).

Bioinformatic analysis of the whole genomes was conducted with the Bacterial Isolate Genome Sequence Database (6 ) genome comparator tool available within the V. parahaemolyticus MLST database (http://pubmlst.org/vparahaemolyticus) (7, 8 ).

Assembled data were uploaded on usmirror1.pubmlst.org/campylobacter/ database and implemented with the Bacterial Isolate Genome Sequence Database (BIGS-DB) software [ 46] and allelic profiles for all common loci were retrieved.

Bacterial Isolate Genome Sequence Database (BIGSdb) (Jolley and Maiden 2010) was used to perform BlastN and BlastP searches of the 1,695 genomes using loci identified using the above approach.

These contigs were deposited in the Bacterial Isolate Genome Sequence Database (BIGSDB) along with the isolate provenance and name, after which contigs were scanned for genes within the cps locus and tagged and alleles were assigned (26 ).