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The kinetics of atrazine mineralization were measured to link the bacterial community changes with the degradation function.
Bacterial community changes resulting from the invasion of a single bacterial pathogen are expected to follow a similar succession of bacterial groups across all infected colonies, yet the results from the current study indicate a different mechanism.
Culture-based methods have proven successful to document bacterial community changes on bleached and diseased corals [25], [48] [50], but the difficulties associated with culturing marine bacteria coupled with a bias towards groups of bacteria that readily grow on general culture media limits the usefulness of such methods in describing bacterial diversity in environmental samples [7], [51], [52].
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A comparison of 16S sequence data and fecal indicator qPCR measurements indicated that the latter was a good predictor of overall bacterial community change over time (rho: 0.804 0.814, P = 0.001).
A bacterial community change was also observed from Figure 2A.
Results from Mantel tests (Rho and p values) show that bacterial community change correlated significantly with time.
(C ) PCoA plot based on unweighted UniFrac distances displaying bacterial community change at all sites during decomposition.
Over the 42 d experiment, the cecal bacterial community changed significantly as measured by a variety of ecological metrics and increases in the complexity of co-occurrence networks.
In addition to characterizing bacterial community change of skin samples, we provide the first high-throughput sequencing characterization of microbial communities in the abdominal cavity and corpse-associated soils.
However, previous literatures had reported the potential relationships between lipid metabolism difference and bacterial community change, indicating that the colonic microflora played important biochemical activities in regulating serum lipids and cholesterol by taking part in metabolism [ 50].
As a result of taxonomic rearrangements in the gut microbiota composition, the changes in microbiome structure we detected as a function of aging allowed us to shed some light on the mechanisms associated with bacterial community change accompanying the overall ageing process.
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