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In the Voigt Lab, Alex is using synthetic biology to manipulate bacterial communities, such as the gut microbiota, to improve human health.
Alpha-diversity of bacterial communities, such as OTU richness, Faith's phylogenetic diversity (PD), Shannon's index and Simpson index, was significantly lower in winter than in other sampling seasons in all tidal flat types, especially in subtidal flat (Fig. 2).
Here, we highlight the effects of mechanics on bacterial behaviors on surfaces at multiple length scales, from single bacteria to the development of multicellular bacterial communities such as biofilms.
Recent advances in molecular methods give new possibilities to identify species in complex bacterial communities such as subgingival biofilms.
The Parallel-META pipeline has been applied on several metagenomic data analysis projects for human-associated bacterial communities, such as oral disease-causing microbial community analysis [ 28].
Since 2002, an increasing number of VMB studies have used molecular characterization of vaginal bacterial communities, such as next generation sequencing, quantitative PCR or microarray analysis of bacterial 16S rRNA genes.
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The rising tidal water causes numerous environmental stresses to bacterial community, such as high salinity, pH and ionic strength5.
The role of the cas2 gene in the acquisition of resistance to new phages might be of particular importance in a metabolically active and proliferating bacterial community, such as the rhizosphere microbiota (Ofek et al., 2014), which represents an ideal substrate for bacteriophage infections.
Can we engineer bacterial communities in such a way that cooperation becomes impossible?
This type of group behaviour is still poorly understood and its characterization provides important information on bacterial structured communities such as biofilms.
To date, the features of PAOs have been studied mainly in bacterial communities, because few such microorganisms have been successfully isolated from EBPR sludge.
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