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Recent research has identified diverse, complex bacterial assemblages in and on corals, including the carbonate skeleton, the internal tissue, and the surface mucopolysaccharide layer [7].
This timing lays the groundwork for developing and testing new hypotheses regarding general regulatory mechanisms that control bacterial colonization and infection of corals, and how interactions among bacteria and juvenile polyps influence the structure of bacterial assemblages in corals.
Equally remarkable is that a large proportion of less abundant members of the bacterial assemblages in the RT have a 97% similarity to rRNA gene sequences deposited in GenBank whose best match is a sequence of a microbe from an acidic environment.
This method has been optimised for the characterisation of cloacal bacterial assemblages in kittiwakes [ 13].
These data provide the framework for future studies targeting the causes and consequences of variation in bacterial assemblages in wild birds.
The data generated in this study will provide new opportunities to investigate the causes and consequences of variation in bacterial assemblages in a wild bird species.
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SVOC exposure may affect metabolism among some components of the bacterial assemblage in submerged sediments (Godoy et al. 1998; Castle et al. 2006; Gomes et al. 2007).
This suggests that the capacity to mineralize PAH carbon is a common feature amongst the bacterial assemblage in these estuarine sediments and could account for an average of 5.6% of bacterial carbon demand (in terms of production) in the summer, 3.3% in the spring (April) and only 1.2% in winter (December).
It was expected that the bacterial assemblage in surface sediments with chronic exposure to an outfall permitted for release of SVOCs and other low molecular weight organics would be less metabolically inhibited by naphthalene additions than those from more pristine areas.
KEGG ECs data analysis found that largest differences were determined by Random Forests and ShotgunFunctionalizeR analyses, finding pronounced differences in bacterial assemblages and in the functional profiles in the three study populations, with distinctive features evident in early infancy as well as adulthood.
Biogeographical issues are also considered in a recent survey on bacterial assemblages (phylum level) in surface waters from the Gulf of Mexico to the southeastern tropical Pacific [385].
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