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Background was calculated as the mean intensity of a 200 micron2 area in the non-injected contralateral cortex.
In the case of transgenic mice, background was calculated as the mean intensity of 10 different 20 micron2 areas of non-labeled cortex.
Background was calculated as the trimmed mean of pixel intensity in spots's local corners.
The array background was calculated as the median signal intensity of all "blank-control" features on the array.
For each array, the background was calculated as follows: log2 median intensity value for negative control probes + (3 * log2 intensity value standard deviation negative control probes).
For each codon cod, the deviation from background was calculated as follows: Δ RSC U cod = RSCU CS cod − RSCU ICCS cod De g cod where Degcod is the degeneracy of the codon family.
Similar(51)
Colour distance between colour loci of the flower perianths and the stimulus background were calculated as the Euclidean distance in the colour hexagon.
The score was calculated as, where P model is calculated with the forward algorithm [ 20], and P background is the probability given a uniform background model.
A local background was calculated for each spot as the median values of the fluorescence intensities of 4 squares surrounding the spot.
A local background was calculated for each spot as the median values of the fluorescence intensities of four squares surrounding the spot.
The average background intensity was calculated as Background Intensity = (Area [out] × Mean Intensity [out] − Area [in] × Mean Intensity [in])/(Area [out] − Area [in]).
More suggestions(16)
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